Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913974.1_cds_XP_016463990.1_57063
CDS Infomation

[gene=LOC107786988] [db_xref=GeneID:107786988] [protein=subtilisin-like protease SBT5.4] [protein_id=XP_016463990.1] [location=join(71054..71137,71525..71634,71722..71819,71965..72129,72212..72320,72525..72744,73271..73591,74012..74106,74499..74744,75429..75543,75627..75840,76516..77072)] [gbkey=CDS]
Sequence

ATGTCTTCTCCAAAAATTTCTATTTTGTTTCTTTTTTTCATTTTATTCTCCGTATGGACA
ACACCAGCTTCTGCGACCAAAAAGTCTTATGTGGTATATATGGGATCCCACTCGCATGGC
TCAGCTCTTACTAGAGCTATTCTCCAAAGGGTATCAGATTTCCACATTAACTTCCTCGCA
ACATTCTTGGGATGCAAAGATAAAGCAAAGGAATCCATATTTTATTCATATAGAAGGCGT
ATTAACGGTTTTGCAGCTGATTTGGAAGAGAAATTTGTAGCTCTAATTCAATTGCATCCT
AAGGTGATTTCTGTTTTCCCAAATGAAAGGAGAGAATTACACACATTCCATTCTTGGGAT
TTTTTGTCTTTGGAAGACAACGGTGTAGTTACCCCAGGTTCTTTGTGGGAAAAAGCCAAG
TTTGGCCAAGACATTATCATTGGAAATCTTGACACAGGTGTTTGGCCAGAAAATCCAAGT
TTCAATGACGAAGGTTATGGGCCCATTCCATCAAGATGGAAGGGTGAATGTCAAAATGAC
GATAAGGTTCCATTTTCCTGCAATAGGAAACTTATAGGAGCTAGGTATTTCCACAAGGGA
TATGATGATTTAAGGGGAAATAATAATACAAGTAATATTCCAAACTCTTCCCGCGATACC
GAAGGGCATGGAACACACACACTGTCCACTGCGGCTGGTAACTTTGCTCCCAACGCAAGT
GTCATAGGAGTGTACAATGGAACTGCAAAAGGTGGTGCACCTAAAGCTAGAGTTGCTGCT
TATAAGGTGTGTTGGCCAGCAAAACAAGGAGGAGGGTGTTTTGATGCTGATATCCTCAAA
GCATTCGATTTCGCCATAGATGACGGTGTTGATGTGATCTCCGCCTCTGTTGGGGGAAAA
CCACGCCCATATTTTAGAGACGCGGCAGCGATCGGGGCGTTTCACGCCATGAAAGAAGGT
ATTGTAGTGGTTACTTCTGCAGGAAACTCAGGACCTATGCTTTCAACTGTAGGCAATATT
GCACCTTGGATGATAACCGTGGGAGCAAGTACTATTGATCGTGAATTTGAATCCAACGTC
AAACTTCAAAATGGACTTACCATCAAGGGAACGAGCATTTCTTATCCATTGCCAGAAGAA
AAATTCTATCCACTTATTAGTGGGGAGCTAGCTAAAGCTGCAAATGCAACAGTTGAAGAT
GCTAAGCTTTGTAAGCAAGCAACATTGGATGCTAGTAAAGTGAAAGGCAAGATTTTGGTT
TGTTTAAGGGGAAATAACACCAGAGTAGATAAAGGGCACCAAGCTGTAATTGGAGGTGCT
GTTGGAATGATACTTTGCAATGACCAAACGAGTGGCAATGACATTATTGCAGACGTTCAT
CTCCTCCCAGCTTCCCATATCACTTACAACGACGGTCTTGCCGTTTTTGCCTACATCAAT
TCTACAAACAATGCTATGGGTTCAATAACCGCACCAAAGGCAATATTAGGCATAAAACCT
GCTCCAACTATGGCTTCTTTTTCATCCAGAGGTCCTAATTTGATTACACCTGCAATCCTC
AAGCCTGATATCACTGCACCTGGAGTGAATGTTATAGCTGCCTATACAGAAGGAAATAAC
CCCTCAAATGAAGTGTTTGACAATCGTAGAACAACATTCAATGTAATGTCTGGAACATCA
ATGTCTTGTCCTCATGTCTCTGGAGTTGTAGGACTTCTCAAAGCTATTCATCCTGATTGG
AGTCCTGCTGCCATTCGATCTGCCCTCATGACTACTGCAAGCCCAATAGATAATACAGGA
AAACCGTTGCTTGATACCACCAAGGAAGCAGCAACACCATTTGCATCTGGAGCTGGGCAT
ATAAGACCAAATCTTGCTTCTGATCCTGGACTAGTATATGACTTAGAAGTGAATGATTAT
TTAAACTTTCTATGTGCATCTGGCTATGATAGTCAAGTCATTCGCACCTTCAACAAAGCT
CCTTATATATGTCCACCACTTAGTAATTCAAGTCTTTTGGAATTCAATTATCCTTCAATA
ACTGTTCCAGCTCTTTCTGGCAACTTAATTGTGACTCGTACACTGACAAATGTCGGTCCA
CCGAGTACTTACACGGCTCGAGTTGGCCAGCCTCCTGGAATCTCAGTGGTTGTGGAACCA
AATGTGTTGATATTCAAGAGCCAAGGTCAGAAGGAGAGGTTTAGTTTGCATATTAAAGCT
GTGAATACTACTTATTATCTTGCTGGGGTAGATCAACACGTATATGGAGAGTTGGTATGG
TCAGATGGTACTCATACTGTCACAAGTCCAATTACTGTGGAAATTGCTCGTTGA

Peptide Sequence

PEP ID

XP_016463990.1
PEP Infomation

PREDICTED: subtilisin-like protease SBT5.4 [Nicotiana tabacum]
Sequence

MSSPKISILFLFFILFSVWTTPASATKKSYVVYMGSHSHGSALTRAILQRVSDFHINFLA
TFLGCKDKAKESIFYSYRRRINGFAADLEEKFVALIQLHPKVISVFPNERRELHTFHSWD
FLSLEDNGVVTPGSLWEKAKFGQDIIIGNLDTGVWPENPSFNDEGYGPIPSRWKGECQND
DKVPFSCNRKLIGARYFHKGYDDLRGNNNTSNIPNSSRDTEGHGTHTLSTAAGNFAPNAS
VIGVYNGTAKGGAPKARVAAYKVCWPAKQGGGCFDADILKAFDFAIDDGVDVISASVGGK
PRPYFRDAAAIGAFHAMKEGIVVVTSAGNSGPMLSTVGNIAPWMITVGASTIDREFESNV
KLQNGLTIKGTSISYPLPEEKFYPLISGELAKAANATVEDAKLCKQATLDASKVKGKILV
CLRGNNTRVDKGHQAVIGGAVGMILCNDQTSGNDIIADVHLLPASHITYNDGLAVFAYIN
STNNAMGSITAPKAILGIKPAPTMASFSSRGPNLITPAILKPDITAPGVNVIAAYTEGNN
PSNEVFDNRRTTFNVMSGTSMSCPHVSGVVGLLKAIHPDWSPAAIRSALMTTASPIDNTG
KPLLDTTKEAATPFASGAGHIRPNLASDPGLVYDLEVNDYLNFLCASGYDSQVIRTFNKA
PYICPPLSNSSLLEFNYPSITVPALSGNLIVTRTLTNVGPPSTYTARVGQPPGISVVVEP
NVLIFKSQGQKERFSLHIKAVNTTYYLAGVDQHVYGELVWSDGTHTVTSPITVEIAR

Transcript Sequence

Gene sequence data has not been registered.